Welcome to the q-bio Summer School and Conference!

The Ninth q-bio Conference: Poster Session 1

From Q-bio
  1. Deborah A Striegel (spotlight), Laboratory of Biological Modeling, NIDDK, NIH, Morphology of Pancreatic Islet Cytoarchitecture with Type 2 Diabetes
  2. Jae Kyoung Kim (spotlight), Mathematical Biosciences Institute, The Ohio State Univ., Determining the validity of Hill functions in stochastic simulations
  3. Ryan Nikin-Beers (spotlight), Department of Mathematics, Virginia Tech, The role of antibody in dengue viral infection
  4. Ji Hyun Bak (spotlight), Princeton University, Characterizing the statistical properties of protein surfaces
  5. Abed Alnaif (spotlight), University of California, Irvine, Pattern formation and morphogen gradients: A causality dilemma
  6. Rory Donovan (spotlight), CMU-Pitt Ph.D. Program in Computational Biology, Enhanced Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories
  7. Mark Transtrum (spotlight), Brigham Young University, Effective models of emergent behavior from the manifold boundary approximation method
  8. Vipul Periwal (spotlight), LBM, NIDDK, NIH, The Universality of Cancer
  9. Steve Andrews, Fred Hutchinson Cancer Research Center, A Model of Lipid A Biosynthesis in E. coli
  10. Jeanette Baran-Gale, University of North Carolina at Chapel Hill, Dynamics of estrogen stimulated regulatory networks in breast cancer
  11. Madeleine Bonsma, University of Toronto, Building bacteria-phage interaction networks using the CRISPR locus
  12. Anthony Burnetti, Duke University, The yeast metabolic cycle is coupled to cell division cycle Start across diverse strains
  13. Minghan Chen, Computer Science Department, Virginia Tech, Two-dimensional Modeling on PopZ Bipolarization in Caulobacter Cell Cycle
  14. Matthias Chung, Virginia Tech, Optimal Experimental Design for Biological Systems
  15. Nicola Coker Gordon, Oxford University, Regulation of T Cell Receptor Phosphorylation
  16. Jayajit Das, Battelle Center for Mathematical Medicine, the Research Institute at the Nationwide Children's Hospital and the Ohio State University, Restricted energy dissipation induces glass-like kinetics in high precision responses
  17. Andrey Dovzhenok, University of Cincinnati, Comprehensive Modeling and Validation of Glucose and Temperature Compensation of the Neurospora Circadian Clock
  18. Cemal Erdem, University of Pittsburgh, Characterization of differences in IGF1 and insulin induced proteomic signaling cascades
  19. Chad Glen, Georgia Institute of Technology, Dynamic Intercellular Communication within Pluripotency Networks
  20. Emine Guven, West Virginia University, Toward a Predictive Model of Spontaneous Clustering of VEGF Receptors
  21. Silke Hauf, Virginia Tech, Abrupt sister chromatid splitting in anaphase without obligatory positive feedback
  22. Noriko Hiroi, Keio University, Self-organization mechanism affects the time dependency of molecular diffusion
  23. Philip Hochendoner, Virginia Tech, Queueing Entrainment – Downstream control of a synthetic oscillator - Moved to Poster Session 2, abstract number 1.
  24. Jiayin Hong, Peking University, Role for Clockwork Orange Gene in Drosophila Circadian Clock
  25. Chieh Hsu, School of Biosciences, University of Kent, Mapping of deterministic versus stochastic network activity by feedback splitting
  26. Shuqiang Huang, Duke, Dynamic control and quantification of bacterial population dynamics in droplets
  27. Sergey Klimov, Georgia State University, From Clinical Slides to Mathematical Prediction, a Twofold Approach
  28. Justin Krueger, Virginia Tech, Robust Parameter Estimation for Biological Systems
  29. Kyung Suk Lee, Harvard University, Serotonin-dependent Pulse-Width-Modulation control of food uptake
  30. Melissa Lever, William Dunn School of Pathology, Oxford University, Phenotypic models of T cell activation
  31. Xiang Liu, Peking University, A Model for β-cell’s death during ER stress
  32. Mathias Løvgreen Engel, Linding Lab, Deep Learning of Cell Morphologies for Kinome Wide Screening
  33. Sarah Lueck, Institute of Theoretical Biology, Humboldt University Berlin, Rhythmic Degradation Explains and Unifies Circadian Transcriptome and Proteome Data
  34. Mariana Martínez Sánchez, Universidad Nacional Autónoma de México, Minimal Regulatory Network of Extrinsic and Intrinsic Factors Recovers Patterns of CD4+ T Cell Differentiation and Plasticity
  35. Patrick McCarter, University of North Carolina at Chapel Hill, Ranking proposed yeast feedback networks through Approximate Bayesian Computation parameter estimation and model selection.
  36. Sina Mirzaeifard, University of Tennessee, Knoxville, Actin-Membrane Interactions in Membrane Nanotubes
  37. Michele Monti, FOM institute Amolf, Time perception in cyanobacteria
  38. Manikandan Narayanan, NIH, Robust inference of expression heterogeneity from simultaneous single- and k-cell profiling
  39. Curtis Ogle, Virginia Tech, Multi-Protease Queueing
  40. Libertad Pantoja-Hernández, Departamento de Control Automático, CINVESTAV, The TF binding mechanism role in the retroactivity impact
  41. Joshua Porter, National Cancer Institute, p53 pulses diversify and coordinate target gene expression
  42. Robert Pullen, University of Tennessee, Receptor binding, membrane deformations, and signal propagation at the cell membrane
  43. Shanshan Qin, Center for Quantitative Biology,Peking University, Correlation of Gene Expression Noise During Cell Fate Transition
  44. Nicholas Rossi, University of Vermont, Propagation of signals from the transcription factor MarA to downstream genes
  45. Warren Ruder, Virginia Tech, Simulating Emergent Behavior in Host-Microbiome Systems using Robots and Synthetic Biology
  46. John Sekar, University of Pittsburgh, Visualizing Regulation in Rule-based Models
  47. Rati Sharma, Johns Hopkins University, Directional Accuracy in a Model of Gradient Signaling during Yeast Mating
  48. Christopher Short, West Virginia University, VEGF binding with high affinity domains
  49. Emrah Simsek, Emory University, Phenotypic heterogeneity of nutrient-starved E. coli cells
  50. Edward Stites, Washington University in St. Louis, Analysis of Ras as a tumor suppressor
  51. Bradford Taylor, Georgia Institute of Technology, Frequency of multiply infecting bacteriophage in natural environments exposed by spatial models
  52. Xiao-jun Tian, University of Pittsburgh, Ultrasensitivity and Bistability arising from miRNA-mRNA Reciprocal Interaction
  53. Lior Vered, Department of Chemistry, University of North Carolina - Chapel Hill, Bistability and Hysteresis in the Pheromone Response Pathway
  54. Margaritis Voliotis, University of Bristol, Stochastic Simulation of Biomolecular Networks in Dynamic Environments
  55. Qiuyue Wang, Peking University, Using NF-κB modules and DNA elements to engineer combinatorial and dynamic gene regulation
  56. Andrew White, Brigham Young University, The limitations of model-based experimental design in sloppy systems
  57. Martin Wong, University of Sydney, Mathematical Modelling Reveals Missing Mechanism in AKT Activation
  58. Peipei Yin, Peking University, Quantitative Analysis on Mitochondrial Apoptosis Pathway
  59. Ruoshi Yuan, Shanghai Center for Systems Biomedicine Shanghai Jiao Tong University, Construction of Potential Landscape Uncovers Robust Dynamical Structure in Prostate Carcinogenesis
  60. Jingyu Zhang, University of Pittsburgh, Crosstalk among TGF-β, Hedgehog and Wnt signaling pathway during EMT
  61. Charles Zhao, Georgia Institute of Technology, Examining Genetic Background and Synaptic Morphology with Heterozygotes
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