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Second q-bio Summer School: Genetic Regulatory Networks

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This section of the summer school is organized by Michael Wall. Please address all questions about this section of the summer school to its organizer.


Lecture 1

Scope
Prokaryotic gene regulation
Lecturer
Michael E. Wall, Los Alamos National Laboratory
Homework

1. Test a common assumption of TF-dependent promoter activity models

2. Extract model parameters from an early paper on lac induction

Lecture 2

Scope (part 1)
Boolean network models of genetic regulatory systems
Lecturer
Cynthia J. Olson Reichhardt, Los Alamos National Laboratory
Scope (part 2)
Information theoretic reconstruction of transcriptional networks from mRNA data
Lecturer
Ilya Nemenman, Los Alamos National Laboratory

Lecture 3

Scope
Eukaryotic gene regulation
Lecturer
Andre Levchenko, Johns Hopkins University

Lecture 4

Scope
Stochastic effects in genetic regulatory networks and signal-transduction systems
Lecturer
Tomasz Lipniacki, Institute of Fundamental Technological Research

Lecture 5

Scope
Characterization of protein-DNA interactions
Lecturer
Martha L. Bulyk, Harvard Medical School