Welcome to the q-bio Summer School and Conference!

Theoretical Basis of Molecular Dynamics

From Q-bio

Read before lecture - M.E. Tuckerman and G.J. Martyna - Understanding Modern Molecular Dynamics:Techniques and Applications - J. Phys. Chem. B 2000, 104,159-178

This first tutorial on Molecular Dynamics will be a general introduction to the theoretical foundations of the method. There will be also a quick introduction to the NAMD software package and to the VMD visualization tool.